EENdb - TALEN/ZFN
Search TALENs/ZFNs targeting the sequence:
- >=3 nt (recommend >=6 nt), 5'->3', any strand
- use [...] for alternate nucleotides; N = [ACGT]
Search TALENs/ZFNs targeting the gene(s):
- <=10 symbols or IDs (currently Ensembl ID only)
- symbols are variable in publications and databases
Search EENs by first reported reference:
- <=10 PubMed IDs or surnames of 1st authors.

EEN Search Result
ZFN targeting sequences from pig (Sus scrofa): 5 ZFN records match.
(Click on ID to see details)


ZFN IDWhole SiteSpecies & LocusZFP Domain L.ZFP Domain R.LinkerFokIConstruc.Modif.Ref.Effic.
ZN0119 cATCCCATTCCCGAGAgctgatCCAATGGTTGCAGATt
gTAGGGTAAGGGCTCTcgactaGGTTACCAACGTCTAa
    5F+[6]+5F
pig, PPARG G ZPU0021 ZPU0023 LRGS EL+KK Sangamo NHEJ 21502977 R
ZN0119-T002 cATTCCATTCCCCAGAtataaCCACTGTTTGGAGTTt
gTAAGGTAAGGGGTCTatattGGTGACAAACCTCAAa
    5F+[5]+5F
pig, CASP10, intron G ZPU0021-T002 ZPU0023-T002 LRGS EL+KK Sangamo NHEJ 21502977 R
ZN0119-T003 tATGGCATTGCCGTGAgttgcgCTATAGGTTGCAGATg
aTACCGTAACGGCACTcaacgcGATATCCAACGTCTAc
    5F+[6]+5F
pig, (intergenic) G ZPU0021-T003 ZPU0023-T003 LRGS EL+KK Sangamo NHEJ 21502977 R
ZN0137 tCGGTGGCTCAGCTACaggcctGGTGGTACAAGGCACa
aGCCACCGAGTCGATGtccggaCCACCATGTTCCGTGt
    5F+[6]+5F
pig, GGTA1 G ZP10753 ZP10754 LRGS EL+KK Sangamo NHEJ 21730124 R
ZN0208 nGTCATCTTTTACATCatggtgGATGATATCTCCAGGATGCCn
nCAGTAGAAAATGTAGtaccacCTACTATAGAGGTCCTACGGn
    5F+[6]+(2+6F)
pig, GGTA1 G ZPU0061 ZPU0062 (N/A) (N/A) Sangamo NHEJ 22795273 R




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Off-target or secondary target
EEN targeted same or overlapped site with another reported EEN
EEN reported with low or no activity
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