EENdb - TALEN/ZFN
Search TALENs/ZFNs targeting the sequence:
- >=3 nt (recommend >=6 nt), 5'->3', any strand
- use [...] for alternate nucleotides; N = [ACGT]
Search TALENs/ZFNs targeting the gene(s):
- <=10 symbols or IDs (currently Ensembl ID only)
- symbols are variable in publications and databases
Search EENs by first reported reference:
- <=10 PubMed IDs or surnames of 1st authors.

EEN Search Result
ZFN targeting sequences from rat (Rattus norvegicus): 12 ZFN records match.
(Click on ID to see details)


ZFN IDWhole SiteSpecies & LocusZFP Domain L.ZFP Domain R.LinkerFokIConstruc.Modif.Ref.Effic.
ZN0053 cGAGAGCCCCCTGTCTgatgagAATTTGGTGGCCATGGGCt
gCTCTCGGGGGACAGActactcTTAAACCACCGGTACCCGa
    5F+[6]+6F
rat, IGG2B G ZP10460 ZP10461 LRGS EL+KK Sangamo NHEJ 19628861 R
ZN0054 cGTGCACCAAAACTTCTCCtcccacTACCGGGCCACCATTGGTg
gCACGTGGTTTTGAAGAGGagggtgATGGCCCGGTGGTAACCAc
    6F+[6]+6F
rat, Rab38 G ZP10462 ZP10463 LRGS EL+KK Sangamo NHEJ 19628861 R
ZN0075 aCCAACCTCACTATGCactataGGTATGAGAAGGGGGa
tGGTTGGAGTGATACGtgatatCCATACTCTTCCCCCt
    5F+[6]+5F
rat, Il2rg, exon-intron G ZPU0005 ZPU0006 LRGS EL+KK Sangamo NHEJ 20111598 R
ZN0081B gGCCATCAGCCCTgttcttGGACTGTCAGCTGGTa
cCGGTAGTCGGGAcaagaaCCTGACAGTCGACCAt
    4F+[6]+5F
rat, Abcb1a G ZP10553 ZP10554 LRGS WT Sangamo NHEJ 20628038 R
ZN0090 tCAGGTGTGCCCATCCagctgaGTTAAGGTGGAGa
aGTCCACACGGGTAGGtcgactCAATTCCACCTCt
    5F+[6]+4F
rat, (Ig J locus) G ZPU0017 ZPU0018 (N/A) (N/A) Sangamo NHEJ-DisDel 21038471 R
ZN0091 tCAGGACCAGGACACCTgcagcAGCTGGCAGGAAGCAGGTc
aGTCCTGGTCCTGTGGAcgtcgTCGACCGTCCTTCGTCCAg
    (5F+1)+[5]+6F
rat, (Ig J locus) G ZPU0019 ZPU0020 (N/A) (N/A) Sangamo NHEJ-DisDel 21038471 R
ZN0092 tCAAATCTGCCGTGTAtgtgggGACAAGGCCaATGGCTa
aGTTTAGACGGCACATacacccCTGTTCCGGtTACCGAt
    5F+[6]+(3F+1+2F)
rat, Nr1i2 G ZP10555 ZP10556 LRGS WT Sangamo NHEJ; HR 21151125 R
ZN0115 tACCCTTCATgCTGGCCaagtttGACGGGGTTCTGGGCATGg
aTGGGAAGTAcGACCGGttcaaaCTGCCCCAAGACCCGTACc
    (2F+1+3F)+[6]+6F
rat, Ren G ZP10701 ZP10702 (N/A) (N/A) Sangamo NHEJ 21242461 R
ZN0186 gCTCTACTACAGCATGgagaagTAAGTGGTGTCGGAGTGTg
cGAGATGATGTCGTACctcttcATTCACCACAGCCTCACAc
    5F+[6]+6F
rat, Ncf2 G ZPU0049 ZPU0050 (N/A) (N/A) Sangamo NHEJ 22326221 R
ZN0210 gTTCTCCAGTCTTCCTCCAGatgatATTCTGGTAAGGAGCCGGg
cAAGAGGTCAGAAGGAGGTCtactaTAAGACCATTCCTCGGCCc
    (1+6F)+[5]+6F
rat, Tp53 G ZPU0065 ZPU0066 (N/A) (N/A) Sangamo NHEJ 22917926 R
ZN0212 gCTGTGCCTATCCacaaaGTCCAGGATGACACCa
cGACACGGATAGGtgtttCAGGTCCTACTGTGGt
    4F+[5]+5F
rat, Lep G ZPU0069 ZPU0070 (N/A) (N/A) Sangamo NHEJ 22948215 R
ZN0217 aTGCTGCCGGGGCCAGTTAccagctGATCCGtGGCCTGGGGc
tACGACGGCCCCGGTCAATggtcgaCTAGGCaCCGGACCCCg
    6F+[6]+(2F+1+3F)
rat, Prkdc G ZPU0073 ZPU0074 (N/A) (N/A) Sangamo NHEJ 22981234 R




Legends
Off-target or secondary target
EEN targeted same or overlapped site with another reported EEN
EEN reported with low or no activity
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