EENdb - TALEN/ZFN
Search TALENs/ZFNs targeting the sequence:
- >=3 nt (recommend >=6 nt), 5'->3', any strand
- use [...] for alternate nucleotides; N = [ACGT]
Search TALENs/ZFNs targeting the gene(s):
- <=10 symbols or IDs (currently Ensembl ID only)
- symbols are variable in publications and databases
Search EENs by first reported reference:
- <=10 PubMed IDs or surnames of 1st authors.

EEN Search Result
EEN targeting gene with symbol containing 'POU5F1 OCT4': 3 ZFN, 2 TALEN, 0 CRISPR/Cas records match.
(Click on ID to see details)


TALEN IDWhole SiteSpecies & LocusRVDsFrameworkFokIConstruc.Modif.Ref.Effic.
TN0028 tCACCTGCAGCTGCCCAGacctggcacccaggagAGGAGCAGGCAGGGTCa
aGTGGACGTCGACGGGTCtggaccgtgggtcctcTCCTCGTCCGTCCCAGt
    17+[16]+16
human, POU5F1, intron G C (std.) +63 WT (N/A) NHEJ, HR 21738127 R
TN0029 tCTGGGCTCTCCCATgcattcaaactgaggtgcctgcCCTTCTAGGAATGGGGGa
aGACCCGAGAGGGTAcgtaagtttgactccacggacgGGAAGATCCTTACCCCCt
    14+[22]+17
human, POU5F1, 3'-UTR G C (std.) +63 WT (N/A) NHEJ, HR 21738127 R



ZFN IDWhole SiteSpecies & LocusZFP Domain L.ZFP Domain R.LinkerFokIConstruc.Modif.Ref.Effic.
ZN0058 cCAGACCtGGCACCCAGgagagGAGCAGGCAGGGTCAGCTg
gGTCTGGaCCGTGGGTCctctcCTCGTCCGTCCCAGTCGAc
    (3F+1+2F)+[5]+6F
human, POU5F1, intron G C ZP10470 ZP10471 LRGS EL+KK Sangamo NHEJ; HR 19680244 R
ZN0059 cTGCAGCTGCCCAGACCTGgcaccCAGGAGaGGAGCAGGCa
gACGTCGACGGGTCTGGACcgtggGTCCTCtCCTCGTCCGt
    6F+[5]+(2F+1+3F)
human, POU5F1, intron G C ZP10472 ZP10473 LRGS EL+KK Sangamo NHEJ; HR 19680244 R
ZN0060 aGTAGTCCTTTGTTACatgcatGAGTCAGTGAACAGGg
tCATCAGGAAACAATGtacgtaCTCAGTCACTTGTCCc
    5F+[6]+5F
human, POU5F1, intron G C ZP10474 ZP10475 LRGS EL+KK Sangamo NHEJ; HR 19680244 R




Legends
Off-target or secondary target
EEN targeted same or overlapped site with another reported EEN
EEN reported with low or no activity
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