EENdb - TALEN/ZFN
Search TALENs/ZFNs targeting the sequence:
- >=3 nt (recommend >=6 nt), 5'->3', any strand
- use [...] for alternate nucleotides; N = [ACGT]
Search TALENs/ZFNs targeting the gene(s):
- <=10 symbols or IDs (currently Ensembl ID only)
- symbols are variable in publications and databases
Search EENs by first reported reference:
- <=10 PubMed IDs or surnames of 1st authors.

EEN Search Result
EEN targeting gene with symbol containing 'LDLR': 0 ZFN, 4 TALEN, 0 CRISPR/Cas records match.
(Click on ID to see details)


TALEN IDWhole SiteSpecies & LocusRVDsFrameworkFokIConstruc.Modif.Ref.Effic.
TN0186 tCCAGTGCAACAGCTCCACCTg...gGGCCTGTGATGGTGATCCTGa
aGGTCACGTTGTCGAGGTGGAc...cCCGGACACTACCACTAGGACt
    20+[16]+20
pig, LDLR G (std.) +63-Goldy WT GG(V&B) NHEJ 23027955 R
TN0187 tCTCCTACAAGTGGATTTgtgatgggaacaccgAGTGCAAGGACGGGTCCGa
aGAGGATGTTCACCTAAAcactacccttgtggcTCACGTTCCTGCCCAGGCt
    17+[15]+18
pig, LDLR G (std.) +63-Goldy WT GG(V&B) NHEJ 23027955 R
TN0188 tCCACTCCAGCTGGCGCTgcgacggagacactgACTGCAAGGACAAGTCTGACGa
aGGTGAGGTCGACCGCGAcgctgcctctgtgacTGACGTTCCTGTTCAGACTGCt
    17+[15]+21
pig, LDLR G (std.) +63-Goldy, +231 WT GG(V&B) 23027955 R No
TN0189 tGCAACAGCTCCACCTGCATCCCTg...gATGGTGATCCTGACTGCGAGGa
aCGTTGTCGAGGTGGACGTAGGGAc...cTACCACTAGGACTGACGCTCCt
    23+[16]+21
pig, LDLR G (std.) +63-Goldy WT GG(V&B) 23027955 R No




Legends
Off-target or secondary target
EEN targeted same or overlapped site with another reported EEN
EEN reported with low or no activity
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