EENdb - TALEN/ZFN  >  TALEN detail
Summary: TALENs related to TNA038.
IDWhole SiteSpecies & LocusLengthRVDsRef.Effic.
TNA038 tCCCTCGCTTTCTGATn(x)ATCGGGCGCTGTCGGGa
aGGGAGCGAAAGACTAn(x)TAGCCCGCGACAGCCCt
(artificial) 15+[x]+16 (std.) 23028976 R
TNA038B tCCCTCGCTTTCTGATn(x)ATCGGGCGCTGTCGGGa
aGGGAGCGAAAGACTAn(x)TAGCCCGCGACAGCCCt
(artificial) 15+[x]+16 NK 23028976 R

User comments


TNA038   ^ Top
IDTNA038
Type / formTALEN, dimer. (T-D)
More about TALEN forms
Target Full sitetCCCTCGCTTTCTGATn(x)ATCGGGCGCTGTCGGGa
aGGGAGCGAAAGACTAn(x)TAGCCCGCGACAGCCCt
LengthLeft+[Spacer]+Right: 15+[x]+16
Speices(artificial)
List EENs targeting genome of (artificial)
Gene / Locus
Location to gene
TALENs Left site & RVDs
HD HD HD NG HD NN HD NG NG NG HD NG NN NI NG
  C  C  C  T  C  G  C  T  T  T  C  T  G  A  T  
Right site & RVDs
HD HD HD NN NI HD NI NN HD NN HD HD HD NN NI NG
  C  C  C  G  A  C  A  G  C  G  C  C  C  G  A  T  
TALEN framework
& linker peptide
+231
More about TALEN frameworks & linker pepetides
FokI variantWT
List EENs with FokI variants WT   More about FokI variants
Construction methodGG(V&B)
List EENs constructed by GG / V / B /    More about TALE construction methods
Effectiveness
(first reported)
Genome modification
method

More about modification methods
Efficiency+ (see ref.), SSA assay, in yeast.
More about efficiency detection methods
Heritability
Specificity
Comments248+249
Reference (first reported)Christian et al., PLoS One., 2012 (23028976 R)
External database
& resource


TNA038B   ^ Top
IDTNA038B
Type / formTALEN, dimer. (T-D)
More about TALEN forms
Target Full sitetCCCTCGCTTTCTGATn(x)ATCGGGCGCTGTCGGGa
aGGGAGCGAAAGACTAn(x)TAGCCCGCGACAGCCCt
LengthLeft+[Spacer]+Right: 15+[x]+16
Speices(artificial)
List EENs targeting genome of (artificial)
Gene / Locus
Location to gene
TALENs Left site & RVDs
HD HD HD NG HD NK HD NG NG NG HD NG NK NI NG
  C  C  C  T  C  G  C  T  T  T  C  T  G  A  T  
Right site & RVDs
HD HD HD NK NI HD NI NK HD NK HD HD HD NK NI NG
  C  C  C  G  A  C  A  G  C  G  C  C  C  G  A  T  
TALEN framework
& linker peptide
+231
More about TALEN frameworks & linker pepetides
FokI variantWT
List EENs with FokI variants WT   More about FokI variants
Construction methodGG(V&B)
List EENs constructed by GG / V / B /    More about TALE construction methods
Effectiveness
(first reported)
Genome modification
method

More about modification methods
Efficiency+ (see ref.), SSA assay, in yeast.
More about efficiency detection methods
Heritability
Specificity
Comments248+249 NK
Reference (first reported)Christian et al., PLoS One., 2012 (23028976 R)
External database
& resource




User comments   ^ Top

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